Preheat the oven to 350° F. Lightly grease or line a baking sheet with parchment paper. While the oven is heating, place the pecans in an oven-safe skillet and roast in the oven for 5 minutes. Remove from oven.
Cream the butter, granulated sugar, and brown sugar until smooth. Add the egg and vanilla and beat until fluffy.
Mix together the flours, baking powder, baking soda, cinnamon, and salt, and add to butter, sugar and egg mixture. Beat until well incorporated, and then stir in oats, chocolate chips, and roasted pecans.
Roll dough into walnut-sized balls, place the sheet and bake for 14-17 minutes. Allow to cool before serving.